From 8e4a460d2d2366ecf9b1b6965bab32a490752258 Mon Sep 17 00:00:00 2001
From: Kyle Isom <kyle@imap.cc>
Date: Sat, 26 Apr 2025 15:30:18 -0700
Subject: [PATCH] updating org stuff with bibtex support

---
 ensure.el            |  1 +
 init.el              | 11 +++--------
 publish.el => org.el | 10 +++++++++-
 3 files changed, 13 insertions(+), 9 deletions(-)
 rename publish.el => org.el (96%)

diff --git a/ensure.el b/ensure.el
index 1f8c161..0acddcd 100644
--- a/ensure.el
+++ b/ensure.el
@@ -11,6 +11,7 @@
        '(ag
 	 auto-complete
 	 c-eldoc
+	 ebib
 	 ellama
 	 elpy
 	 exec-path-from-shell
diff --git a/init.el b/init.el
index d9d62c6..2ee45de 100644
--- a/init.el
+++ b/init.el
@@ -260,13 +260,8 @@ present on disk."
  '(ellama-sessions-directory (cache-path "ellama-sessions"))
  '(global-font-lock-mode t)
  '(org-html-mathjax-template
-   "<script>\12  window.MathJax = {\12    loader: {load: ['[tex]/physics']},\12    tex: {\12      ams: {\12        multlineWidth: '%MULTLINEWIDTH'\12      },\12      packages: {'[+]': ['physics']},\12      tags: '%TAGS',\12      tagSide: '%TAGSIDE',\12      tagIndent: '%TAGINDENT'\12    },\12    chtml: {\12      scale: %SCALE,\12      displayAlign: '%ALIGN',\12      displayIndent: '%INDENT'\12    },\12    svg: {\12      scale: %SCALE,\12      styles: {\12         color: \"#002266\",\12      },\12      displayAlign: '%ALIGN',\12      displayIndent: '%INDENT'\12    },\12    output: {\12      font: '%FONT',\12      displayOverflow: '%OVERFLOW'\12    }\12  };\12</script>\12\12<script\12  id=\"MathJax-script\"\12  async\12  src=\"/s/mathjax.js\">\12</script>")
- '(package-selected-packages
-   '(ag auto-complete c-eldoc ellama elpy exec-path-from-shell geiser
-	go-mode gruvbox-theme keychain-environment lua-mode luarocks
-	magit markdown-mode mwim nix-mode nix-modeline nix-ts-mode
-	nixos-options org-journal org-roam paredit pelican-mode
-	projectile racket-mode scpaste slime undo-tree))))
+   "<script>\12  window.MathJax = {\12    loader: {load: ['[tex]/physics']},\12    tex: {\12      ams: {\12        multlineWidth: '%MULTLINEWIDTH'\12      },\12      packages: {'[+]': ['physics']},\12      tags: '%TAGS',\12      tagSide: '%TAGSIDE',\12      tagIndent: '%TAGINDENT'\12    },\12    chtml: {\12      scale: %SCALE,\12      displayAlign: '%ALIGN',\12      displayIndent: '%INDENT'\12    },\12    svg: {\12      scale: %SCALE,\12      styles: {\12         color: \"#002266\",\12      },\12      displayAlign: '%ALIGN',\12      displayIndent: '%INDENT'\12    },\12    output: {\12      font: '%FONT',\12      displayOverflow: '%OVERFLOW'\12    }\12  };\12</script>\12\12<script\12  id=\"MathJax-script\"\12  async\12  src=\"/s/mathjax.js\">\12</script>"))
+
 (custom-set-faces
  ;; custom-set-faces was added by Custom.
  ;; If you edit it by hand, you could mess it up, so be careful.
@@ -289,7 +284,7 @@ present on disk."
 (put 'downcase-region 'disabled nil)
 
 ;;;; org-mode publishing
-(load (emacs-path "publish.el"))
+(load (emacs-path "org.el"))
 
 (defvar *host-font-size*
   #s(hash-table
diff --git a/publish.el b/org.el
similarity index 96%
rename from publish.el
rename to org.el
index a8e3508..8945a22 100644
--- a/publish.el
+++ b/org.el
@@ -3,6 +3,14 @@
 ;;;
 ;;; publishing my notes docs
 
+(use-package org-ref
+  :ensure t
+  :config
+  (setq org-ref-bibliography-files '("~/org/references.bib")
+        org-ref-default-bibliography "~/org/references.bib"
+        org-ref-pdf-directory "~/org/"
+        org-ref-notes-directory "~/org/"))
+
 (use-package org-roam
   :after org
   :custom
@@ -12,7 +20,7 @@
    '(("d" "default" plain "%?"
       :target (file+head "%<%Y%m%d%H%M%S>-${slug}.org"
 			 "#+title: ${title}\n#+date: %U\n#+options: toc:nil num:nil\n#+filetags:\n\n")
-       :unnarrowed t)
+      :unnarrowed t)
      ("a" "article" plain "- Source: [[%^{Url}][%^{Title}]]\n- Author: /%^{Author}/\n- Year: /%^{Year}/\n\n* Highlights / Notes\n"
       :target (file+head "%<%Y%m%d%H%M%S>-${slug}.org"
 			 "#+title: ${title}\n#+date: %U\n#+options: toc:nil num:nil\n#+filetags: article:\n\n")