Add Nix flake for mcp and mcp-agent

Exposes two packages:
- default (mcp CLI) for operator workstations
- mcp-agent for managed nodes

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

vendor/modernc.org/libc/atomic32.go

@@ -0,0 +1,16 @@
+// Copyright 2024 The Libc Authors. All rights reserved.
+// Use of this source code is governed by a BSD-style
+// license that can be found in the LICENSE file.
+
+//go:build linux && (386 || arm)
+
+package libc // import "modernc.org/libc"
+
+import (
+	mbits "math/bits"
+)
+
+// static inline int a_ctz_l(unsigned long x)
+func _a_ctz_l(tls *TLS, x ulong) int32 {
+	return int32(mbits.TrailingZeros32(x))
+}